SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_162800793
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr5:139268141-139278656
Size: 10515
Super-enhancer rank 793
Number of SE elements: 3
ChIP density(Case|Control): 8188.0305|1963.1505
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNHG4 ;
ROSE Overlap SNHG4 ; MATR3 ;
ROSE Proximal MATR3 ; SNORA74A ;
ROSE Closest SNHG4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800793 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers