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Super-enhancer overview

SE ID: SE_02_162800699
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr3:129181078-129185786
Size: 4708
Super-enhancer rank 699
Number of SE elements: 2
ChIP density(Case|Control): 7218.3056|528.2376
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CNBP ;
ROSE Overlap CNBP ;
ROSE Proximal ISY1-RAB43 ; CNBP ;
ROSE Closest CNBP ;
Lasso ;
PreSTIGE ;
ABC HMCES ; H1FX ; RPN1 ; COPG1 ; RPL32P3 ; H1FX-AS1 ; EFCAB12 ; RAB43 ; IFT122 ; MBD4 ; PLXND1 ; TMCC1-AS1 ; FAM86HP ; COL6A5 ; PIK3R4 ; NEK11 ; ASTE1 ; NUDT16P1 ; GP9 ; RAB7A ; KIAA1257 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800699 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers