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Super-enhancer overview

SE ID: SE_02_162800526
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr4:38661587-38672974
Size: 11387
Super-enhancer rank 526
Number of SE elements: 4
ChIP density(Case|Control): 9749.5494|1898.2129
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF3-AS1 ;
ROSE Overlap KLF3-AS1 ; KLF3 ;
ROSE Proximal ;
ROSE Closest KLF3-AS1 ;
Lasso ;
PreSTIGE ;
ABC LINC01258 ; KLF3 ; KLF3-AS1 ; TLR1 ; LOC100508631 ; RELL1 ; PGM2 ; TLR6 ; FAM114A1 ; WDR19 ; RFC1 ; KLB ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800526 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers