SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_162800514
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr19:40748494-40752566
Size: 4072
Super-enhancer rank 514
Number of SE elements: 1
ChIP density(Case|Control): 8751.9496|809.1064
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNRPA ;
ROSE Overlap C19orf54 ; SNRPA ;
ROSE Proximal MIA ; MIA-RAB4B ; ADCK4 ; EGLN2 ; RAB4B-EGLN2 ; ITPKC ;
ROSE Closest SNRPA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800514 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers