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Super-enhancer overview

SE ID: SE_02_162800449
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr6_GL000252v2_alt:3042271-3084355
Size: 42084
Super-enhancer rank 449
Number of SE elements: 7
ChIP density(Case|Control): 12423.1968|3985.3548
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap SNORD48 ; HSPA1B ; C6orf48 ; LSM2 ; HSPA1A ; VARS ; HSPA1L ;
ROSE Proximal ;
ROSE Closest VARS ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800449 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers