SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_162600441
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 region S1KO
Genomic region: chr9:129568072-129611036
Size: 42964
Super-enhancer rank 441
Number of SE elements: 9
ChIP density(Case|Control): 23041.5932|8799.0272
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NTMT1 ;
ROSE Overlap NTMT1 ;
ROSE Proximal NTMT1 ; C9orf50 ; ASB6 ;
ROSE Closest NTMT1 ;
Lasso ASB6 ; PRRX2 ; NTMT1 ;
PreSTIGE ;
ABC ZBTB43 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162600441 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers