SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_162600216
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 region S1KO
Genomic region: chr19:1406927-1416898
Size: 9971
Super-enhancer rank 216
Number of SE elements: 3
ChIP density(Case|Control): 23586.4005|2890.5929
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DAZAP1 ;
ROSE Overlap DAZAP1 ;
ROSE Proximal GAMT ; NDUFS7 ; APC2 ; RPS15 ;
ROSE Closest DAZAP1 ;
Lasso RPS15 ; APC2 ; NDUFS7 ; MEX3D ; GAMT ; DAZAP1 ; C19orf25 ; MUM1 ; TCF3 ; ADAMTSL5 ; REEP6 ;
PreSTIGE ;
ABC DAZAP1 ; GAMT ; RPS15 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162600216 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers