SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_162600178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 region S1KO
Genomic region: chr19:4368014-4390526
Size: 22512
Super-enhancer rank 178
Number of SE elements: 7
ChIP density(Case|Control): 28216.5408|5830.608
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3GL1 ;
ROSE Overlap SH3GL1 ;
ROSE Proximal CHAF1A ; MPND ; STAP2 ;
ROSE Closest SH3GL1 ;
Lasso ;
PreSTIGE ;
ABC CHAF1A ; SH3GL1 ; SHD ; FSD1 ; STAP2 ; MPND ; HDGFRP2 ; CCDC94 ; UBXN6 ; EBI3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162600178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers