SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_159300365
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: lung
Biosample name: NCIH1048 FHD286
Genomic region: chr19:55383009-55387225
Size: 4216
Super-enhancer rank 365
Number of SE elements: 1
ChIP density(Case|Control): 17283.9136|654.7448
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL28 ;
ROSE Overlap RPL28 ; TMEM238 ;
ROSE Proximal TMEM190 ; MIR6805 ; UBE2S ; FAM71E2 ; RPL28 ; SUV420H2 ; COX6B2 ; IL11 ;
ROSE Closest RPL28 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM238 ; IL11 ; RPL28 ; ISOC2 ; TMEM150B ; MIR6805 ; SHISA7 ; TMEM190 ; SUV420H2 ; COX6B2 ; ZNF628 ; UBE2S ; FAM71E2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_159300365 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers