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Super-enhancer overview

SE ID: SE_02_156300242
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-12_SDHC deletion
Genomic region: chr6:44225588-44238150
Size: 12562
Super-enhancer rank 242
Number of SE elements: 6
ChIP density(Case|Control): 3870.3522|1376.7952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC29A1;
ROSE Overlap SLC29A1;
ROSE Proximal SLC29A1; SLC35B2; HSP90AB1; TMEM151B; NFKBIE; MIR4647;
ROSE Closest SLC29A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156300242 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers