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Super-enhancer overview

SE ID: SE_02_156300221
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-12_SDHC deletion
Genomic region: chr17:48541333-48544682
Size: 3349
Super-enhancer rank 221
Number of SE elements: 1
ChIP density(Case|Control): 3015.1047|388.484
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB-AS1;
ROSE Overlap HOXB2; HOXB-AS1;
ROSE Proximal HOXB3; HOXB-AS3; HOXB1; MIR10A; HOXB4; HOXB5;
ROSE Closest HOXB-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156300221 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers