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Super-enhancer overview

SE ID: SE_02_156200128
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-11_SDHC deletion
Genomic region: chr20:62354409-62374873
Size: 20464
Super-enhancer rank 128
Number of SE elements: 6
ChIP density(Case|Control): 7821.3408|1678.048
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAMA5;
ROSE Overlap LAMA5; LAMA5-AS1;
ROSE Proximal RPS21; LAMA5-AS1; MIR4758; CABLES2;
ROSE Closest LAMA5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156200128 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers