SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156200109
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-11_SDHC deletion
Genomic region: chr19:42269330-42287179
Size: 17849
Super-enhancer rank 109
Number of SE elements: 8
ChIP density(Case|Control): 8676.3989|2068.6991
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CIC;
ROSE Overlap CIC;
ROSE Proximal PAFAH1B3; GSK3A; ZNF526; PRR19; ERF; MEGF8; DEDD2; TMEM145;
ROSE Closest CIC;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156200109 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers