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Super-enhancer overview

SE ID: SE_02_156100274
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-10_PDGFRA e1
Genomic region: chr19:12778204-12783246
Size: 5042
Super-enhancer rank 274
Number of SE elements: 4
ChIP density(Case|Control): 1829.7418|315.6292
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOOK2;
ROSE Overlap ;
ROSE Proximal BEST2; RTBDN; ASNA1; HOOK2; RNASEH2A; PRDX2; JUNB; MIR5684; C19orf43;
ROSE Closest HOOK2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156100274 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers