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Super-enhancer overview

SE ID: SE_02_156001419
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr5:170287182-170315548
Size: 28366
Super-enhancer rank 1419
Number of SE elements: 10
ChIP density(Case|Control): 12390.2688|3540.0768
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LCP2 ;
ROSE Overlap LCP2 ;
ROSE Proximal LINC01366 ; KCNIP1 ;
ROSE Closest LCP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C5orf58 ; KCNMB1 ; LINC01366 ; CTD-2270F17.1 ; LCP2 ; KCNIP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001419 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers