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Super-enhancer overview

SE ID: SE_02_156001361
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:56627941-56637638
Size: 9697
Super-enhancer rank 1361
Number of SE elements: 4
ChIP density(Case|Control): 10281.7291|1161.7006
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BAZ2A ;
ROSE Overlap BAZ2A ;
ROSE Proximal ATP5B ; SNORD59A ; SNORD59B ;
ROSE Closest BAZ2A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTGES3 ; NACA ; BAZ2A ; SNORD59A ; SNORD59B ; ATP5B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001361 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers