SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156001318
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr2:109209176-109268719
Size: 59543
Super-enhancer rank 1318
Number of SE elements: 17
ChIP density(Case|Control): 16285.0105|6990.3482
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4266 ;
ROSE Overlap SH3RF3 ;
ROSE Proximal MIR4266 ;
ROSE Closest MIR4266 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4266 ; MIR4265 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001318 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers