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Super-enhancer overview

SE ID: SE_02_156001284
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr4:185491281-185544213
Size: 52932
Super-enhancer rank 1284
Number of SE elements: 9
ChIP density(Case|Control): 16244.8308|6791.1756
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PDLIM3 ;
ROSE Overlap PDLIM3 ;
ROSE Proximal PDLIM3 ; CCDC110 ;
ROSE Closest PDLIM3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CCDC110 ; PDLIM3 ; UFSP2 ; C4orf47 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001284 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers