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Super-enhancer overview

SE ID: SE_02_156001110
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr20:62782048-62796946
Size: 14898
Super-enhancer rank 1110
Number of SE elements: 3
ChIP density(Case|Control): 12356.4012|1921.842
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MRGBP ;
ROSE Overlap MRGBP ;
ROSE Proximal OGFR ; OGFR-AS1 ; COL9A3 ; LINC00659 ; DPH3P1 ;
ROSE Closest MRGBP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00659 ; TCFL5 ; OGFR-AS1 ; MRGBP ; NTSR1 ; COL9A3 ; OGFR ; DPH3P1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001110 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers