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Super-enhancer overview

SE ID: SE_02_156001103
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr19:18279017-18283730
Size: 4713
Super-enhancer rank 1103
Number of SE elements: 1
ChIP density(Case|Control): 11173.1091|694.2249
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JUND ;
ROSE Overlap MIR3188 ; JUND ;
ROSE Proximal PDE4C ; LSM4 ; JUND ; LOC729966 ; KIAA1683 ;
ROSE Closest JUND ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LSM4 ; PDE4C ; MPV17L2 ; JUND ; KIAA1683 ; LOC729966 ; PGPEP1 ; RAB3A ; MIR3188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001103 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers