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Super-enhancer overview

SE ID: SE_02_156001072
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:228139308-228162800
Size: 23492
Super-enhancer rank 1072
Number of SE elements: 4
ChIP density(Case|Control): 12904.1556|2276.3748
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GJC2 ;
ROSE Overlap GUK1 ; GJC2 ;
ROSE Proximal MRPL55 ; IBA57-AS1 ; GUK1 ; IBA57 ; C1orf35 ; OBSCN ; MIR3620 ;
ROSE Closest GJC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MRPL55 ; IBA57 ; ARF1 ; GUK1 ; OBSCN ; GJC2 ; C1orf35 ; C1orf145 ; IBA57-AS1 ; MIR3620 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001072 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers