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Super-enhancer overview

SE ID: SE_02_156001041
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr2:218395345-218401981
Size: 6636
Super-enhancer rank 1041
Number of SE elements: 1
ChIP density(Case|Control): 11675.3784|864.0072
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTDSP1 ;
ROSE Overlap SLC11A1 ; CTDSP1 ;
ROSE Proximal CATIP-AS2 ; MIR26B ; CATIP ; VIL1 ; CTDSP1 ; CATIP-AS1 ;
ROSE Closest CTDSP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6810 ; VIL1 ; SLC11A1 ; CATIP ; CATIP-AS2 ; CTDSP1 ; PNKD ; MIR26B ; CATIP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156001041 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers