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Super-enhancer overview

SE ID: SE_02_156000809
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:145976783-145986983
Size: 10200
Super-enhancer rank 809
Number of SE elements: 1
ChIP density(Case|Control): 13910.76|1574.88
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TXNIP ;
ROSE Overlap POLR3GL ;
ROSE Proximal RBM8A ; LIX1L ; ANKRD34A ; TXNIP ; HFE2 ;
ROSE Closest TXNIP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GNRHR2 ; RBM8A ; POLR3GL ; LIX1L ; ANKRD35 ; ITGA10 ; TXNIP ; RNVU1-6 ; HFE2 ; PEX11B ; LOC101928979 ; ANKRD34A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000809 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers