SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000729
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr2:200337383-200384691
Size: 47308
Super-enhancer rank 729
Number of SE elements: 25
ChIP density(Case|Control): 19963.976|6902.2372
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPATS2L ;
ROSE Overlap SPATS2L ;
ROSE Proximal SPATS2L ;
ROSE Closest SPATS2L ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SPATS2L ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000729 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers