SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000724
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:2270026-2322803
Size: 52777
Super-enhancer rank 724
Number of SE elements: 16
ChIP density(Case|Control): 17886.1253|4781.5962
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SKI ;
ROSE Overlap SKI ; MORN1 ;
ROSE Proximal LOC100129534 ;
ROSE Closest LOC100129534 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RER1 ; C1orf86 ; SKI ; MORN1 ; LOC100129534 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000724 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers