SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000656
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:15833258-15852076
Size: 18818
Super-enhancer rank 656
Number of SE elements: 4
ChIP density(Case|Control): 16298.2698|2312.7322
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPEN ;
ROSE Overlap FLJ37453 ; SPEN ;
ROSE Proximal UQCRHL ;
ROSE Closest SPEN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UQCRHL ; FBLIM1 ; FLJ37453 ; MIR5096 ; SPEN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000656 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers