SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_156000566
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr3:18400542-18447181
Size: 46639
Super-enhancer rank 566
Number of SE elements: 7
ChIP density(Case|Control): 22050.9192|6720.6799
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SATB1;
ROSE Overlap SATB1; SATB1-AS1;
ROSE Proximal ;
ROSE Closest SATB1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000566 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers