SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000369
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr3:37922799-37974664
Size: 51865
Super-enhancer rank 369
Number of SE elements: 22
ChIP density(Case|Control): 25792.4645|6903.2315
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR26A1 ;
ROSE Overlap MIR26A1 ; CTDSPL ;
ROSE Proximal VILL ;
ROSE Closest MIR26A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLCD1 ; MIR26A1 ; ITGA9-AS1 ; VILL ; CTDSPL ; DLEC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000369 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers