SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000327
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr10:12680107-12711728
Size: 31621
Super-enhancer rank 327
Number of SE elements: 18
ChIP density(Case|Control): 24566.3549|4559.7482
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4480 ;
ROSE Overlap CAMK1D ;
ROSE Proximal MIR4481 ; MIR548Q ;
ROSE Closest MIR548Q ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4481 ; MIR548Q ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000327 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers