SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000263
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:8146305-8156387
Size: 10082
Super-enhancer rank 263
Number of SE elements: 1
ChIP density(Case|Control): 23372.0924|1469.9556
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PER1 ;
ROSE Overlap PER1 ;
ROSE Proximal MIR4521 ; HES7 ; ALOXE3 ; BORCS6 ; SNORD118 ; MIR6883 ; TMEM107 ; VAMP2 ;
ROSE Closest PER1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR4314 ; AURKB ; ALOXE3 ; CTC1 ; HES7 ; SNORD118 ; MIR4521 ; MIR6883 ; PFAS ; VAMP2 ; ALOX12B ; PER1 ; C17orf59 ; TMEM107 ; LINC00324 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000263 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers