SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000138
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr20:31661331-31724336
Size: 63005
Super-enhancer rank 138
Number of SE elements: 27
ChIP density(Case|Control): 37103.6445|7421.989
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ABALON ;
ROSE Overlap ABALON ; BCL2L1 ;
ROSE Proximal TPX2 ; BCL2L1 ; COX4I2 ;
ROSE Closest ABALON ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BCL2L1 ; ID1 ; MIR3193 ; COX4I2 ; TPX2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000138 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers