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Super-enhancer overview

SE ID: SE_02_156000088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr5:132406541-132501224
Size: 94683
Super-enhancer rank 88
Number of SE elements: 28
ChIP density(Case|Control): 46915.4265|11428.2381
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IRF1;
ROSE Overlap C5orf56; IRF1;
ROSE Proximal IL5; SLC22A5; LOC553103; MIR3936;
ROSE Closest IRF1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers