SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_156000067
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:2053385-2107937
Size: 54552
Super-enhancer rank 67
Number of SE elements: 13
ChIP density(Case|Control): 46500.1248|6775.3584
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMG6;
ROSE Overlap HIC1; SMG6;
ROSE Proximal DPH1; RTN4RL1; MIR132; MIR212; OVCA2;
ROSE Closest SMG6;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000067 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers