SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000048
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr15:96330656-96358769
Size: 28113
Super-enhancer rank 48
Number of SE elements: 1
ChIP density(Case|Control): 47904.552|3337.0131
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR2F2 ;
ROSE Overlap NR2F2 ; MIR1469 ;
ROSE Proximal NR2F2-AS1 ;
ROSE Closest NR2F2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NR2F2 ; NR2F2-AS1 ; MIR1469 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000048 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers