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Super-enhancer overview

SE ID: SE_02_155800167
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-7_PDGFRA e18
Genomic region: chr17:48574373-48583160
Size: 8787
Super-enhancer rank 167
Number of SE elements: 1
ChIP density(Case|Control): 12765.7536|1006.1115
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB4;
ROSE Overlap MIR10A; HOXB3; HOXB4;
ROSE Proximal HOXB-AS3; HOXB1; HOXB2; HOXB7; HOXB9; HOXB6; HOXB8; HOXB-AS1; HOXB5; MIR196A1;
ROSE Closest HOXB4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_155800167 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers