SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_155700088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-6_KIT e11/16
Genomic region: chr20:296204-311582
Size: 15378
Super-enhancer rank 88
Number of SE elements: 5
ChIP density(Case|Control): 13794.066|3269.3628
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZCCHC3;
ROSE Overlap ZCCHC3;
ROSE Proximal SOX12; NRSN2-AS1; NRSN2; DEFB132; C20orf96;
ROSE Closest ZCCHC3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_155700088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers