SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_155600330
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-5_KIT e9
Genomic region: chr12:52023076-52045882
Size: 22806
Super-enhancer rank 330
Number of SE elements: 6
ChIP density(Case|Control): 12974.3334|3345.6402
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR4A1;
ROSE Overlap NR4A1;
ROSE Proximal GRASP; OR7E47P; ATG101; NR4A1;
ROSE Closest NR4A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_155600330 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers