SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_154900588
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-430B
Genomic region: chr6:44233666-44238010
Size: 4344
Super-enhancer rank 588
Number of SE elements: 5
ChIP density(Case|Control): 21963.264|8069.8488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HSP90AB1;
ROSE Overlap SLC29A1;
ROSE Proximal SLC29A1; SLC35B2; HSP90AB1; TMEM151B; NFKBIE; MIR4647;
ROSE Closest HSP90AB1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_154900588 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers