SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_154101125
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal
Biosample name: HNE1
Genomic region: chr3:12749949-12764009
Size: 14060
Super-enhancer rank 1125
Number of SE elements: 10
ChIP density(Case|Control): 12104.254|1217.596
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM40 ;
ROSE Overlap TMEM40 ;
ROSE Proximal TMEM40 ; CAND2 ;
ROSE Closest TMEM40 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM40 ; RPL32 ; CAND2 ; RAF1 ; SNORA7A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_154101125 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers