SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_154100947
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal
Biosample name: HNE1
Genomic region: chr7:99498178-99507301
Size: 9123
Super-enhancer rank 947
Number of SE elements: 2
ChIP density(Case|Control): 13496.5662|1512.5934
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZKSCAN5 ;
ROSE Overlap ZKSCAN5 ; ZNF394 ;
ROSE Proximal FAM200A ; ATP5J2 ; ZNF789 ;
ROSE Closest ZKSCAN5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ATP5J2-PTCD1 ; ZNF655 ; ATP5J2 ; ZNF394 ; GS1-259H13.2 ; CPSF4 ; BUD31 ; PDAP1 ; PTCD1 ; ZKSCAN5 ; FAM200A ; ZNF789 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_154100947 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers