SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_154100243
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Nasopharyngeal
Biosample name: HNE1
Genomic region: chr3:48590173-48616515
Size: 26342
Super-enhancer rank 243
Number of SE elements: 8
ChIP density(Case|Control): 28304.479|2729.0312
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UQCRC1 ;
ROSE Overlap COL7A1 ; UQCRC1 ;
ROSE Proximal UCN2 ; MIR711 ; MIR6824 ; CELSR3 ; MIR6823 ; SLC26A6 ; CELSR3-AS1 ; MIR4793 ; PFKFB4 ; TMEM89 ;
ROSE Closest UQCRC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC26A6 ; SHISA5 ; MIR4793 ; PFKFB4 ; UCN2 ; MIR6824 ; COL7A1 ; MIR6823 ; UQCRC1 ; MIR711 ; TMEM89 ; CELSR3 ; NCKIPSD ; CELSR3-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_154100243 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers