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Super-enhancer overview

SE ID: SE_02_153700520
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-231_ER?_L540Q_45min
Genomic region: chr3:196274534-196288826
Size: 14292
Super-enhancer rank 520
Number of SE elements: 3
ChIP density(Case|Control): 26654.58|1815.084
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCYT1A;
ROSE Overlap PCYT1A;
ROSE Proximal PCYT1A; TM4SF19; TCTEX1D2; TM4SF19-AS1;
ROSE Closest PCYT1A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_153700520 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers