SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_152700058
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: naive embryonic stem cell
Genomic region: chr12:120224838-120245781
Size: 20943
Super-enhancer rank 58
Number of SE elements: 13
ChIP density(Case|Control): 56164.9374|2626.2522
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN;
ROSE Overlap PXN;
ROSE Proximal RPLP0; RNU4-1; GCN1; PXN-AS1; PXN; RNU4-2;
ROSE Closest PXN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_152700058 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers