SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_149301038
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skin
Biosample name: SK-MEL-5_DMSO_6h
Genomic region: chr13:29844042-29858371
Size: 14329
Super-enhancer rank 1038
Number of SE elements: 8
ChIP density(Case|Control): 11169.4555|1953.0427
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBL3 ;
ROSE Overlap UBL3 ;
ROSE Proximal LINC00297 ;
ROSE Closest UBL3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00297 ; LINC00572 ; UBL3 ; LINC00544 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_149301038 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers