SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_149300757
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skin
Biosample name: SK-MEL-5_DMSO_6h
Genomic region: chr21:41234183-41255157
Size: 20974
Super-enhancer rank 757
Number of SE elements: 12
ChIP density(Case|Control): 12966.1268|1700.9914
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLAC4 ;
ROSE Overlap BACE2 ;
ROSE Proximal PLAC4 ;
ROSE Closest PLAC4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PLAC4 ; MIR3197 ; FAM3B ; BACE2 ; LINC00323 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_149300757 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers