SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_149300484
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skin
Biosample name: SK-MEL-5_DMSO_6h
Genomic region: chr22:30319409-30343069
Size: 23660
Super-enhancer rank 484
Number of SE elements: 5
ChIP density(Case|Control): 17983.966|3371.55
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D10A ;
ROSE Overlap TBC1D10A ; SF3A1 ;
ROSE Proximal KIAA1656 ; RNF215 ; GATSL3 ; CCDC157 ;
ROSE Closest TBC1D10A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LIF ; TBC1D10A ; KIAA1656 ; MTFP1 ; RNF215 ; SEC14L2 ; OSM ; SF3A1 ; GATSL3 ; CCDC157 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_149300484 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers