SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800683
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr3:50125748-50167321
Size: 41573
Super-enhancer rank 683
Number of SE elements: 8
ChIP density(Case|Control): 15444.3695|2290.6723
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEMA3F ;
ROSE Overlap SEMA3F ;
ROSE Proximal GNAT1 ; RBM5 ; RBM5-AS1 ; SLC38A3 ; MIR566 ;
ROSE Closest SEMA3F ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GNAI2 ; RBM5-AS1 ; GNAT1 ; RBM5 ; MIR566 ; SLC38A3 ; SEMA3F ; MIR5787 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800683 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers