SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800679
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr12:54580008-54604224
Size: 24216
Super-enhancer rank 679
Number of SE elements: 8
ChIP density(Case|Control): 15382.0032|2198.8128
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R1A ;
ROSE Overlap PPP1R1A ;
ROSE Proximal PDE1B ; LACRT ; DCD ; GLYCAM1 ;
ROSE Closest PPP1R1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GLYCAM1 ; LACRT ; DCD ; NCKAP1L ; PDE1B ; PPP1R1A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800679 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers