SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800595
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr12:57887974-57899536
Size: 11562
Super-enhancer rank 595
Number of SE elements: 6
ChIP density(Case|Control): 15414.4584|1222.1034
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100506844 ;
ROSE Overlap ;
ROSE Proximal CTDSP2 ; LOC100506844 ; XRCC6BP1 ;
ROSE Closest LOC100506844 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC100506844 ; CTDSP2 ; XRCC6BP1 ; AVIL ; MIR26A2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800595 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers