SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_148800424
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone
Biosample name: TC-71
Genomic region: chr1:161181187-161203547
Size: 22360
Super-enhancer rank 424
Number of SE elements: 5
ChIP density(Case|Control): 19102.148|2036.996
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ADAMTS4 ;
ROSE Overlap NDUFS2 ; ADAMTS4 ;
ROSE Proximal FCER1G ; DEDD ; MIR5187 ; TOMM40L ; PPOX ; USP21 ; UFC1 ; APOA2 ; NR1I3 ; B4GALT3 ;
ROSE Closest ADAMTS4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA USP21 ; NR1I3 ; NIT1 ; DEDD ; UFC1 ; PPOX ; TOMM40L ; NDUFS2 ; FCER1G ; MIR5187 ; KLHDC9 ; ADAMTS4 ; PCP4L1 ; B4GALT3 ; APOA2 ; PFDN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_148800424 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers